Public Software Resources
Automatic Mass Spectral Deconvolution and Identification System (AMIDS). AMDIS is used for GC-MS data processing.
XCMS is used for LCMS data processing.
Metabolomics Ion-Based Data Extraction Algorithm (MET-IDEA). MET-IDEA is used for GC-MS peak quantitation.
MetaboAnalyst 3.0. An excellent online tool for multivariate analysis of metabolomics data.
MS-DIAL: Data-independent MS/MS deconvolution for comprehensive metabolome analysis.